IQ-TREE multicore version 1.6.12 for Linux 64-bit built Aug 15 2019
Developed by Bui Quang Minh, Nguyen Lam Tung, Olga Chernomor,
Heiko Schmidt, Dominik Schrempf, Michael Woodhams.

Host:    fermat (AVX2, FMA3, 1009 GB RAM)
Command: ../../iqtree -s Pettalidae_16S_mafft_gblocks.fasta -m TESTNEW -bb 1000 -alrt 1000
Seed:    26066 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Wed Jun 15 22:53:45 2022
Kernel:  AVX+FMA - 1 threads (128 CPU cores detected)

HINT: Use -nt option to specify number of threads because your CPU has 128 cores!
HINT: -nt AUTO will automatically determine the best number of threads to use.

Reading alignment file Pettalidae_16S_mafft_gblocks.fasta ... Fasta format detected
Alignment most likely contains DNA/RNA sequences
Alignment has 95 sequences with 397 columns, 331 distinct patterns
255 parsimony-informative, 49 singleton sites, 93 constant sites
                                             Gap/Ambiguity  Composition  p-value
   1  Limulus_polyphemus                             9.07%    failed      0.00%
   2  Cyphophthalmus_duricorius_MCZ-135009           1.26%    failed      4.53%
   3  Paramiopsalis_ramulosus_MCZ-135006             3.02%    failed      1.83%
   4  Parasiro_coiffaiti_MCZ-132372                 15.11%    failed      0.91%
   5  Parasiro_minor_MCZ-132374                      0.25%    failed      0.04%
   6  Suzukielus_sauteri_MCZ-132256                  0.25%    passed     67.14%
   7  Metasiro_savannahensis_MCZ-134557              3.02%    failed      1.02%
   8  Aoraki_westlandica_MCZ-134653                  0.00%    passed     86.27%
   9  Aoraki_crypta_MCZ-101289                       6.30%    passed     90.54%
  10  Aoraki_denticulata_denticulata_MCZ-134642      0.25%    passed     84.74%
  11  Aoraki_denticulata_denticulata_MCZ-134647_4   17.13%    passed     82.75%
  12  Aoraki_denticulata_denticulata_MCZ-134639_1   17.13%    passed     93.85%
  13  Aoraki_denticulata_denticulata_MCZ-134646_1   17.13%    passed     79.00%
  14  Aoraki_denticulata_denticulata_MCZ-134659_1   17.13%    passed     89.62%
  15  Aoraki_denticulata_major_MCZ-134644            0.25%    passed     93.26%
  16  Aoraki_denticulata_major_MCZ-35669             0.50%    passed     94.21%
  17  Aoraki_granulosa_MCZ-134675                    2.77%    passed     95.83%
  18  Aoraki_granulosa_MCZ-134684                    0.00%    passed     87.26%
  19  Aoraki_healyi_MCZ-134638                       0.00%    passed     81.83%
  20  Aoraki_longitarsa_MCZ-35659                    0.50%    passed     98.22%
  21  Aoraki_tumidata_MCZ-133838                     1.01%    passed     90.11%
  22  Archaeopurcellia_eureka_162243                 0.50%    passed     31.19%
  23  Archaeopurcellia_eureka_162249                 0.50%    passed     31.19%
  24  Austropurcellia_acuta_MCZ-134701               0.00%    failed      0.50%
  25  Austropurcellia_arcticosa_MCZ-132325           1.01%    passed     96.26%
  26  Austropurcellia_clousei_MCZ-132339             0.50%    failed      0.19%
  27  Austropurcellia_culminis_MCZ-132322            0.00%    passed     90.36%
  28  Austropurcellia_despectata_MCZ-132324          0.50%    passed     88.52%
  29  Austropurcellia_giribeti_MCZ-132337            0.00%    passed     98.31%
  30  Austropurcellia_scoparia_MCZ-134700            0.00%    passed     54.02%
  31  Austropurcellia_sharmai_MCZ-134698             0.25%    passed     88.67%
  32  Austropurcellia_vicina_MCZ-132318              0.00%    passed     99.20%
  33  Chileogovea_jocasta_MCZ-134713                 0.00%    passed     92.42%
  34  Chileogovea_jocasta_MCZ-134714                 0.00%    passed     86.32%
  35  Chileogovea_jocasta_MCZ-134715                 0.00%    passed     80.79%
  36  Chileogovea_oedipus_MCZ-134709                 0.00%    passed     97.84%
  37  Chileogovea_oedipus_MCZ-134710                 0.00%    passed     97.84%
  38  Chileogovea_oedipus_MCZ-134711                 0.00%    passed     95.27%
  39  Chileogovea_oedipus_MCZ-134712                 0.00%    passed     95.27%
  40  Karripurcellia_harveyi_MCZ-132345              0.00%    passed     62.25%
  41  Karripurcellia_peckorum_MCZ-134719             0.00%    passed     55.72%
  42  Karripurcellia_peckorum_MCZ-134720            11.59%    passed     60.21%
  43  Karripurcellia_peckorum_MCZ-134721             6.30%    passed     64.61%
  44  Neopurcellia_salmoni_MCZ-29317                 1.51%    passed     99.52%
  45  Neopurcellia_salmoni_MCZ-134739                1.51%    passed     99.52%
  46  Neopurcellia_salmoni_MCZ-134741                1.51%    passed     99.52%
  47  Parapurcellia_amatola_MCZ-133841               1.51%    passed     39.42%
  48  Parapurcellia_convexa_MCZ-134744               1.51%    passed     58.52%
  49  Parapurcellia_convexa_MCZ-128902               1.51%    passed     70.84%
  50  Parapurcellia_fissa_MCZ-134745                 1.76%    passed     67.72%
  51  Parapurcellia_minuta_MCZ-134747                1.76%    passed     10.71%
  52  Parapurcellia_rumpiana_MCZ-134748              1.76%    passed     65.76%
  53  Parapurcellia_silvicola_MCZ-134742_1           2.02%    passed     33.14%
  54  Parapurcellia_silvicola_MCZ-134742_2           2.77%    passed     47.12%
  55  Parapurcellia_staregai_MCZ-134746              1.51%    passed     91.55%
  56  Pettalus_thwaitesi_MCZ-101223                  0.00%    passed     48.37%
  57  Pettalus_sp_MCZ-132353                         0.00%    passed     36.34%
  58  Pettalus_sp_MCZ-132354                         0.00%    passed     70.88%
  59  Pettalus_sp_MCZ-132357                         0.00%    passed     79.78%
  60  Pettalus_sp_MCZ-132359                         0.00%    passed     73.98%
  61  Pettalus_sp_MCZ-132360                         0.25%    passed     68.28%
  62  Pettalus_sp_MCZ-134967                         0.25%    passed     82.96%
  63  Purcellia_argasiformis_MCZ-134759              0.00%    passed     40.03%
  64  Purcellia_argasiformis_MCZ-134762              0.25%    passed     49.72%
  65  Purcellia_griswoldi_MCZ-134756                 0.50%    passed     76.04%
  66  Purcellia_illustrans_MCZ-60635                 0.25%    passed     59.83%
  67  Purcellia_leleupi_MCZ-129098                   0.00%    passed     85.16%
  68  Purcellia_sp_MCZ-128897                        5.54%    passed     58.79%
  69  Purcellia_sp_MCZ-129493                        0.00%    passed     79.15%
  70  Purcellia_sp_129494                            0.00%    passed     59.34%
  71  Rakaia_antipodiana_MCZ-134580                  0.25%    passed     91.35%
  72  Rakaia_australis_MCZ-134592                    0.25%    passed     70.54%
  73  Rakaia_collaris_MCZ-134574                     0.50%    passed     62.10%
  74  Rakaia_digitata_MCZ-134571                     0.25%    passed     81.48%
  75  Rakaia_dorothea_MCZ-134577                     6.05%    passed     47.62%
  76  Rakaia_florensis_MCZ-134588                    0.25%    passed     78.00%
  77  Rakaia_lindsayi_MCZ-134598                     0.25%    passed     91.17%
  78  Rakaia_macra_MCZ-134582                        0.50%    passed     95.73%
  79  Rakaia_media_MCZ-134581                        0.25%    passed     28.82%
  80  Rakaia_media_MCZ-134605                        0.25%    passed     45.60%
  81  Rakaia_minutissima_MCZ-29280                   0.25%    passed     97.41%
  82  Rakaia_minutissima_MCZ-134591                  1.76%    passed     89.36%
  83  Rakaia_pauli_MCZ-134576                        5.29%    passed     85.56%
  84  Rakaia_solitaria_MCZ-134585                    0.25%    passed     35.91%
  85  Rakaia_sorenseni_MCZ-134567                    0.25%    passed     58.92%
  86  Rakaia_stewartiensis_MCZ-134599               11.59%    passed     48.86%
  87  Rakaia_sp_MCZ-35662                            0.50%    passed     88.14%
  88  Rakaia_sp_MCZ-35668                            0.25%    passed     94.13%
  89  Rakaia_sp_MCZ-100753                           0.50%    passed     27.85%
  90  Rakaia_sp_MCZ-129612                           0.76%    passed     62.60%
  91  Rakaia_sp_MCZ-129614                           1.01%    passed     51.49%
  92  Rakaia_sp_MCZ-133847                           0.76%    passed     53.76%
  93  Rakaia_sp_MCZ-133849                           1.01%    passed     33.58%
  94  Rakaia_sp_MCZ-134575                           0.25%    passed     36.21%
  95  Rakaia_sp_MCZ-134584                           0.76%    passed     70.67%
****  TOTAL                                          2.05%  8 sequences failed composition chi2 test (p-value<5%; df=3)
NOTE: Chileogovea_oedipus_MCZ-134710 is identical to Chileogovea_oedipus_MCZ-134709 but kept for subsequent analysis
NOTE: Chileogovea_oedipus_MCZ-134712 is identical to Chileogovea_oedipus_MCZ-134711 but kept for subsequent analysis
NOTE: Neopurcellia_salmoni_MCZ-134739 is identical to Neopurcellia_salmoni_MCZ-29317 but kept for subsequent analysis
NOTE: 1 identical sequences (see below) will be ignored for subsequent analysis
NOTE: Neopurcellia_salmoni_MCZ-134741 (identical to Neopurcellia_salmoni_MCZ-29317) is ignored but added at the end

For your convenience alignment with unique sequences printed to Pettalidae_16S_mafft_gblocks.fasta.uniqueseq.phy


Create initial parsimony tree by phylogenetic likelihood library (PLL)... 0.014 seconds
NOTE: ModelFinder requires 11 MB RAM!
ModelFinder will test 286 DNA models (sample size: 397) ...
 No. Model         -LnL         df  AIC          AICc         BIC
  1  JC            12220.150    185 24810.300    25136.461    25547.328
  2  JC+I          11742.751    186 23857.502    24188.759    24598.514
  3  JC+G4         11168.691    186 22709.383    23040.640    23450.395
  4  JC+I+G4       11160.120    187 22694.241    23030.662    23439.237
  5  JC+R2         11315.016    187 23004.031    23340.452    23749.027
  6  JC+R3         11169.906    189 22717.813    23064.769    23470.777
  7  JC+R4         11156.501    191 22695.003    23052.778    23455.934
  8  JC+R5         11155.397    193 22696.795    23065.682    23465.695
 14  F81+F         11917.199    188 24210.397    24552.051    24959.377
 15  F81+F+I       11371.216    189 23120.431    23467.388    23873.395
 16  F81+F+G4      10704.056    189 21786.112    22133.068    22539.076
 17  F81+F+I+G4    10695.475    190 21770.951    22123.281    22527.899
 18  F81+F+R2      10898.731    190 22177.462    22529.792    22934.409
 19  F81+F+R3      10712.727    192 21809.454    22172.748    22574.370
 20  F81+F+R4      10692.689    194 21773.378    22147.932    22546.261
 21  F81+F+R5      10690.466    196 21772.932    22159.052    22553.783
 27  K2P           12207.058    186 24786.116    25117.373    25527.128
 28  K2P+I         11729.685    187 23833.370    24169.791    24578.366
 29  K2P+G4        11152.607    187 22679.214    23015.635    23424.210
 30  K2P+I+G4      11144.044    188 22664.087    23005.741    23413.067
 31  K2P+R2        11299.597    188 22975.194    23316.848    23724.174
 32  K2P+R3        11153.388    190 22686.775    23039.105    23443.723
 33  K2P+R4        11139.806    192 22663.613    23026.907    23428.528
 34  K2P+R5        11139.077    194 22666.154    23040.708    23439.038
 40  HKY+F         11841.767    189 24061.534    24408.490    24814.498
 41  HKY+F+I       11265.643    190 22911.285    23263.615    23668.233
 42  HKY+F+G4      10550.437    190 21480.874    21833.204    22237.822
 43  HKY+F+I+G4    10535.856    191 21453.713    21811.489    22214.645
 44  HKY+F+R2      10768.858    191 21919.716    22277.492    22680.648
 45  HKY+F+R3      10562.464    193 21510.928    21879.815    22279.828
 46  HKY+F+R4      10537.911    195 21465.822    21846.121    22242.690
 47  HKY+F+R5      10536.626    197 21467.251    21859.271    22252.087
 53  TNe           12148.353    187 24670.706    25007.127    25415.702
 54  TNe+I         11668.962    188 23713.924    24055.578    24462.904
 55  TNe+G4        11096.002    188 22568.004    22909.658    23316.984
 56  TNe+I+G4      11087.906    189 22553.812    22900.768    23306.776
 57  TNe+R2        11249.127    189 22876.255    23223.211    23629.219
 58  TNe+R3        11097.006    191 22576.011    22933.787    23336.943
 59  TNe+R4        11085.465    193 22556.930    22925.817    23325.830
 60  TNe+R5        11085.140    195 22560.281    22940.579    23337.148
 66  TN+F          11831.113    190 24042.227    24394.557    24799.174
 67  TN+F+I        11256.422    191 22894.843    23252.619    23655.775
 68  TN+F+G4       10545.699    191 21473.398    21831.173    22234.330
 69  TN+F+I+G4     10532.615    192 21449.230    21812.524    22214.146
 70  TN+F+R2       10768.474    192 21920.949    22284.243    22685.864
 71  TN+F+R3       10555.775    194 21499.550    21874.105    22272.434
 72  TN+F+R4       10533.253    196 21458.507    21844.627    22239.358
 73  TN+F+R5       10532.333    198 21460.666    21858.666    22249.486
 79  K3P           11909.768    187 24193.536    24529.957    24938.532
 80  K3P+I         11422.982    188 23221.965    23563.619    23970.945
 81  K3P+G4        10823.247    188 22022.493    22364.147    22771.473
 82  K3P+I+G4      10815.145    189 22008.289    22355.246    22761.253
 83  K3P+R2        10979.025    189 22336.049    22683.006    23089.013
 84  K3P+R3        10825.103    191 22032.205    22389.981    22793.137
 85  K3P+R4        10810.066    193 22006.131    22375.018    22775.031
 86  K3P+R5        10809.769    195 22009.538    22389.837    22786.406
 92  K3Pu+F        11739.842    190 23859.683    24212.013    24616.631
 93  K3Pu+F+I      11194.585    191 22771.170    23128.946    23532.102
 94  K3Pu+F+G4     10503.907    191 21389.814    21747.590    22150.746
 95  K3Pu+F+I+G4   10496.304    192 21376.608    21739.902    22141.524
 96  K3Pu+F+R2     10712.306    192 21808.612    22171.906    22573.528
 97  K3Pu+F+R3     10513.720    194 21415.440    21789.995    22188.324
 98  K3Pu+F+R4     10491.204    196 21374.409    21760.529    22155.260
 99  K3Pu+F+R5     10491.097    198 21378.194    21776.194    22167.013
105  TPM2+F        11755.352    190 23890.705    24243.035    24647.653
106  TPM2+F+I      11211.708    191 22805.415    23163.191    23566.347
107  TPM2+F+G4     10511.501    191 21405.002    21762.777    22165.933
108  TPM2+F+I+G4   10502.339    192 21388.679    21751.973    22153.594
109  TPM2+F+R2     10722.616    192 21829.232    22192.526    22594.148
110  TPM2+F+R3     10520.487    194 21428.974    21803.528    22201.858
111  TPM2+F+R4     10498.848    196 21389.696    21775.816    22170.548
112  TPM2+F+R5     10498.696    198 21393.392    21791.392    22182.211
118  TPM2u+F       11755.353    190 23890.707    24243.037    24647.655
119  TPM2u+F+I     11211.709    191 22805.418    23163.193    23566.349
120  TPM2u+F+G4    10511.502    191 21405.003    21762.779    22165.935
121  TPM2u+F+I+G4  10502.353    192 21388.706    21752.001    22153.622
122  TPM2u+F+R2    10722.644    192 21829.287    22192.581    22594.203
123  TPM2u+F+R3    10520.179    194 21428.357    21802.912    22201.241
124  TPM2u+F+R4    10498.853    196 21389.706    21775.826    22170.558
125  TPM2u+F+R5    10498.689    198 21393.378    21791.378    22182.198
131  TPM3+F        11772.402    190 23924.805    24277.135    24681.753
132  TPM3+F+I      11221.368    191 22824.736    23182.511    23585.668
133  TPM3+F+G4     10533.409    191 21448.818    21806.593    22209.749
134  TPM3+F+I+G4   10522.360    192 21428.720    21792.014    22193.636
135  TPM3+F+R2     10740.669    192 21865.337    22228.631    22630.253
136  TPM3+F+R3     10543.310    194 21474.621    21849.175    22247.505
137  TPM3+F+R4     10518.989    196 21429.978    21816.098    22210.829
138  TPM3+F+R5     10518.859    198 21433.718    21831.718    22222.537
144  TPM3u+F       11772.405    190 23924.809    24277.140    24681.757
145  TPM3u+F+I     11221.370    191 22824.741    23182.516    23585.673
146  TPM3u+F+G4    10533.411    191 21448.821    21806.597    22209.753
147  TPM3u+F+I+G4  10522.352    192 21428.704    21791.998    22193.620
148  TPM3u+F+R2    10740.391    192 21864.782    22228.076    22629.698
149  TPM3u+F+R3    10543.303    194 21474.607    21849.161    22247.491
150  TPM3u+F+R4    10518.952    196 21429.904    21816.024    22210.756
151  TPM3u+F+R5    10518.852    198 21433.704    21831.704    22222.523
157  TIMe          11849.276    188 24074.552    24416.206    24823.532
158  TIMe+I        11360.333    189 23098.666    23445.622    23851.629
159  TIMe+G4       10765.239    189 21908.478    22255.434    22661.442
160  TIMe+I+G4     10756.653    190 21893.306    22245.636    22650.254
161  TIMe+R2       10924.798    190 22229.596    22581.926    22986.544
162  TIMe+R3       10767.038    192 21918.076    22281.370    22682.992
163  TIMe+R4       10754.057    194 21896.113    22270.668    22668.997
164  TIMe+R5       10754.035    196 21900.070    22286.190    22680.921
170  TIM+F         11729.126    191 23840.252    24198.027    24601.184
171  TIM+F+I       11185.395    192 22754.790    23118.084    23519.706
172  TIM+F+G4      10500.241    192 21384.482    21747.776    22149.397
173  TIM+F+I+G4    10492.753    193 21371.505    21740.392    22140.405
174  TIM+F+R2      10711.212    193 21808.424    22177.311    22577.324
175  TIM+F+R3      10508.994    195 21407.988    21788.287    22184.856
176  TIM+F+R4      10487.693    197 21369.386    21761.406    22154.222
177  TIM+F+R5      10487.687    199 21373.373    21777.434    22166.177
183  TIM2e         11928.874    188 24233.748    24575.402    24982.728
184  TIM2e+I       11506.430    189 23390.860    23737.816    24143.824
185  TIM2e+G4      10929.351    189 22236.702    22583.659    22989.666
186  TIM2e+I+G4    10920.142    190 22220.285    22572.615    22977.233
187  TIM2e+R2      11077.578    190 22535.155    22887.486    23292.103
188  TIM2e+R3      10927.961    192 22239.922    22603.216    23004.838
189  TIM2e+R4      10914.263    194 22216.525    22591.079    22989.409
190  TIM2e+R5      10914.236    196 22220.473    22606.593    23001.324
196  TIM2+F        11742.631    191 23867.261    24225.037    24628.193
197  TIM2+F+I      11201.160    192 22786.320    23149.614    23551.235
198  TIM2+F+G4     10508.502    192 21401.003    21764.297    22165.919
199  TIM2+F+I+G4   10500.037    193 21386.074    21754.960    22154.973
200  TIM2+F+R2     10721.823    193 21829.645    22198.532    22598.545
201  TIM2+F+R3     10516.798    195 21423.596    21803.895    22200.464
202  TIM2+F+R4     10495.187    197 21384.374    21776.394    22169.209
203  TIM2+F+R5     10495.109    199 21388.218    21792.279    22181.021
209  TIM3e         11842.779    188 24061.557    24403.211    24810.537
210  TIM3e+I       11402.511    189 23183.021    23529.978    23935.985
211  TIM3e+G4      10823.254    189 22024.508    22371.465    22777.472
212  TIM3e+I+G4    10814.839    190 22009.678    22362.008    22766.626
213  TIM3e+R2      10955.418    190 22290.836    22643.166    23047.784
214  TIM3e+R3      10826.741    192 22037.482    22400.776    22802.398
215  TIM3e+R4      10808.380    194 22004.760    22379.315    22777.644
216  TIM3e+R5      10808.373    196 22008.745    22394.865    22789.597
222  TIM3+F        11763.457    191 23908.915    24266.690    24669.847
223  TIM3+F+I      11213.307    192 22810.613    23173.907    23575.529
224  TIM3+F+G4     10527.759    192 21439.518    21802.813    22204.434
225  TIM3+F+I+G4   10517.229    193 21420.458    21789.345    22189.358
226  TIM3+F+R2     10736.728    193 21859.457    22228.344    22628.357
227  TIM3+F+R3     10536.274    195 21462.549    21842.847    22239.416
228  TIM3+F+R4     10514.564    197 21423.128    21815.148    22207.963
229  TIM3+F+R5     10514.560    199 21427.120    21831.181    22219.923
235  TVMe          11646.135    189 23670.270    24017.226    24423.234
236  TVMe+I        11248.732    190 22877.465    23229.795    23634.412
237  TVMe+G4       10662.259    190 21704.518    22056.848    22461.466
238  TVMe+I+G4     10653.867    191 21689.734    22047.510    22450.666
239  TVMe+R2       10794.163    191 21970.326    22328.102    22731.258
240  TVMe+R3       10662.327    193 21710.654    22079.541    22479.554
241  TVMe+R4       10642.385    195 21674.771    22055.069    22451.638
242  TVMe+R5       10642.384    197 21678.767    22070.787    22463.603
248  TVM+F         11686.133    192 23756.266    24119.560    24521.182
249  TVM+F+I       11166.597    193 22719.194    23088.081    23488.094
250  TVM+F+G4      10491.748    193 21369.496    21738.383    22138.396
251  TVM+F+I+G4    10485.897    194 21359.794    21734.349    22132.678
252  TVM+F+R2      10695.138    194 21778.276    22152.831    22551.160
253  TVM+F+R3      10499.865    196 21391.731    21777.851    22172.582
254  TVM+F+R4      10480.410    198 21356.820    21754.820    22145.639
255  TVM+F+R5      10480.410    200 21360.819    21771.023    22157.607
261  SYM           11586.699    190 23553.399    23905.729    24310.347
262  SYM+I         11186.154    191 22754.308    23112.083    23515.240
263  SYM+G4        10601.767    191 21585.534    21943.310    22346.466
264  SYM+I+G4      10595.073    192 21574.146    21937.440    22339.061
265  SYM+R2        10743.069    192 21870.138    22233.432    22635.054
266  SYM+R3        10602.486    194 21592.972    21967.526    22365.855
267  SYM+R4        10587.926    196 21567.853    21953.973    22348.704
268  SYM+R5        10587.924    198 21571.849    21969.849    22360.668
274  GTR+F         11675.400    193 23736.800    24105.687    24505.700
275  GTR+F+I       11157.354    194 22702.709    23077.263    23475.592
276  GTR+F+G4      10487.719    194 21363.438    21737.993    22136.322
277  GTR+F+I+G4    10482.051    195 21354.102    21734.401    22130.970
278  GTR+F+R2      10690.451    195 21770.901    22151.200    22547.769
279  GTR+F+R3      10495.251    197 21384.501    21776.521    22169.336
280  GTR+F+R4      10477.555    199 21353.109    21757.170    22145.912
281  GTR+F+R5      10477.541    201 21357.082    21773.513    22157.853
Akaike Information Criterion:           GTR+F+R4
Corrected Akaike Information Criterion: TVM+F+I+G4
Bayesian Information Criterion:         GTR+F+I+G4
Best-fit model: GTR+F+I+G4 chosen according to BIC

All model information printed to Pettalidae_16S_mafft_gblocks.fasta.model.gz
CPU time for ModelFinder: 39.700 seconds (0h:0m:39s)
Wall-clock time for ModelFinder: 39.942 seconds (0h:0m:39s)
Generating 1000 samples for ultrafast bootstrap (seed: 26066)...

NOTE: 5 MB RAM (0 GB) is required!
Estimate model parameters (epsilon = 0.100)
Thoroughly optimizing +I+G parameters from 10 start values...
Init pinv, alpha: 0.000, 1.000 / Estimate: 0.000, 0.467 / LogL: -10487.715
Init pinv, alpha: 0.026, 1.000 / Estimate: 0.141, 0.672 / LogL: -10482.489
Init pinv, alpha: 0.052, 1.000 / Estimate: 0.144, 0.678 / LogL: -10482.431
Init pinv, alpha: 0.078, 1.000 / Estimate: 0.141, 0.671 / LogL: -10482.500
Init pinv, alpha: 0.104, 1.000 / Estimate: 0.146, 0.684 / LogL: -10482.363
Init pinv, alpha: 0.130, 1.000 / Estimate: 0.156, 0.713 / LogL: -10482.105
Init pinv, alpha: 0.156, 1.000 / Estimate: 0.168, 0.744 / LogL: -10481.942
Init pinv, alpha: 0.182, 1.000 / Estimate: 0.174, 0.760 / LogL: -10481.925
Init pinv, alpha: 0.208, 1.000 / Estimate: 0.178, 0.769 / LogL: -10481.950
Init pinv, alpha: 0.234, 1.000 / Estimate: 0.180, 0.775 / LogL: -10481.980
Optimal pinv,alpha: 0.174, 0.760 / LogL: -10481.925

Parameters optimization took 3.392 sec
Computing ML distances based on estimated model parameters... 0.064 sec
Computing BIONJ tree...
0.026 seconds
Log-likelihood of BIONJ tree: -10461.782
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 98 parsimony trees... 0.853 second
Computing log-likelihood of 98 initial trees ... 1.624 seconds
Current best score: -10447.187

Do NNI search on 20 best initial trees
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 1: -10429.266
Iteration 10 / LogL: -10437.961 / Time: 0h:0m:8s
Iteration 20 / LogL: -10441.473 / Time: 0h:0m:10s
Finish initializing candidate tree set (17)
Current best tree score: -10429.266 / CPU time: 7.241
Number of iterations: 20
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 21: -10427.981
Iteration 30 / LogL: -10435.887 / Time: 0h:0m:13s (0h:0m:42s left)
Iteration 40 / LogL: -10428.162 / Time: 0h:0m:16s (0h:0m:33s left)
Iteration 50 / LogL: -10435.378 / Time: 0h:0m:18s (0h:0m:26s left)
Log-likelihood cutoff on original alignment: -10465.420
Iteration 60 / LogL: -10431.618 / Time: 0h:0m:21s (0h:0m:22s left)
Iteration 70 / LogL: -10437.003 / Time: 0h:0m:23s (0h:0m:17s left)
Iteration 80 / LogL: -10428.609 / Time: 0h:0m:26s (0h:0m:13s left)
Iteration 90 / LogL: -10428.515 / Time: 0h:0m:29s (0h:0m:10s left)
Iteration 100 / LogL: -10428.144 / Time: 0h:0m:31s (0h:0m:6s left)
Log-likelihood cutoff on original alignment: -10465.420
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 0.999
Iteration 110 / LogL: -10428.847 / Time: 0h:0m:34s (0h:0m:28s left)
Iteration 120 / LogL: -10428.059 / Time: 0h:0m:37s (0h:0m:24s left)
TREE SEARCH COMPLETED AFTER 122 ITERATIONS / Time: 0h:0m:37s

--------------------------------------------------------------------
|                    FINALIZING TREE SEARCH                        |
--------------------------------------------------------------------
Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
1. Initial log-likelihood: -10427.981
Optimal log-likelihood: -10427.970
Rate parameters:  A-C: 1.31828  A-G: 6.03318  A-T: 2.88913  C-G: 0.83503  C-T: 4.55098  G-T: 1.00000
Base frequencies:  A: 0.379  C: 0.088  G: 0.154  T: 0.378
Proportion of invariable sites: 0.169
Gamma shape alpha: 0.736
Parameters optimization took 1 rounds (0.039 sec)
BEST SCORE FOUND : -10427.970

Testing tree branches by SH-like aLRT with 1000 replicates...
0.959 sec.
Creating bootstrap support values...
Split supports printed to NEXUS file Pettalidae_16S_mafft_gblocks.fasta.splits.nex
Total tree length: 11.458

Total number of iterations: 122
CPU time used for tree search: 33.616 sec (0h:0m:33s)
Wall-clock time used for tree search: 33.869 sec (0h:0m:33s)
Total CPU time used: 38.356 sec (0h:0m:38s)
Total wall-clock time used: 38.858 sec (0h:0m:38s)

Computing bootstrap consensus tree...
Reading input file Pettalidae_16S_mafft_gblocks.fasta.splits.nex...
94 taxa and 509 splits.
Consensus tree written to Pettalidae_16S_mafft_gblocks.fasta.contree
Reading input trees file Pettalidae_16S_mafft_gblocks.fasta.contree
Log-likelihood of consensus tree: -10428.202

Analysis results written to: 
  IQ-TREE report:                Pettalidae_16S_mafft_gblocks.fasta.iqtree
  Maximum-likelihood tree:       Pettalidae_16S_mafft_gblocks.fasta.treefile
  Likelihood distances:          Pettalidae_16S_mafft_gblocks.fasta.mldist

Ultrafast bootstrap approximation results written to:
  Split support values:          Pettalidae_16S_mafft_gblocks.fasta.splits.nex
  Consensus tree:                Pettalidae_16S_mafft_gblocks.fasta.contree
  Screen log file:               Pettalidae_16S_mafft_gblocks.fasta.log

Date and Time: Wed Jun 15 22:55:04 2022
